Suppression of hepatitis b virus by a combined activity of CRISPR/Cas9 and HBx proteins

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Abstract

Chronic hepatitis B is a severe liver disease associated with persistent infection with hepatitis B virus. According to recent estimations, 250 million people in the world are chronically infected, including 3 million chronically infected people in Russia. Antiviral therapeutics (nucleos(t)ide analogues and PEGylated interferon) suppress viral transcription and replication, but do not eliminate the virus from infected cells. The key reason for HBV persistency is a stable form of the viral genome (covalently closed circular DNA, cccDNA) that exists as a minichromosome protected from novel cccDNA-targeting therapeutics. Novel therapeutic approaches aimed at elimination or inactivation of cccDNA are urgently needed. CRISPR/Cas9 systems induce double strand breaks in target sites of DNA sequences. Experiments with CRISPR/Cas9 demonstrated high antiviral activity and efficient cleavage of cccDNA, but a small part of cccDNA pool remains intact. One of the main reasons of incomplete cccDNA elimination might be the structural organization of cccDNA, which persists in a heterochromatinized, very compacted form and is not be accessible to CRISPR/Cas9 systems. Viral protein HBx unwinds cccDNA and regulates cccDNA epigenetically by recruiting transcription-remodeling factors. In this work, we analyzed effects of CRISPR/Cas9 in combination with an HBxencoding plasmid or plasmids encoding mutant forms of HBx (HBxMut, which does not interact with pro-apoptotic factors Bcl-2 и Bcl-xL, and HBxNesm is localized exclusively in the nucleus and does not generate reactive oxygen species and double strand breaks in the genome). We showed that HBx improves CRISPR/Cas9 efficiency, decreasing pregenomic RNA transcription level over 98%. Moreover, we analyzed optimal ratios of plasmids encoding CRISPR/ Cas9 and HBx proteins for better antiviral efficacy. Furthermore, we discovered that HBx proteins do not have an effect on proliferation and viability of the transfected cells. In conclusion, CRISPR/Cas9 with HBx proteins exhibit high antiviral effect.

About the authors

S. A. Brezgin

Central Research Institute of Epidemiology, Rospotrebnadzor;
Institute of Immunology FMBA

Email: sb@rcvh.ru

Junior Researcher, Laboratory of Viral Hepatitis;

PhD Student, Laboratory of Clinical Pharmacology No. 73,

Moscow

Россия

A. P. Kostyusheva

Central Research Institute of Epidemiology, Rospotrebnadzor

Author for correspondence.
Email: ak@rcvh.ru

Junior Researcher, Laboratory of Viral Hepatitis,

111123, Moscow, Novogireevskaya str., 3A

Россия

V. N. Simirsky

Koltzov Institute of Developmental Biology of Russian Academy of Sciences

Email: simir@mail.ru

PhD (Biology), Senior Researcher,

Moscow

E. V. Volchkova

I.M. Sechenov Moscow State Medical University

Email: fake@neicon.ru

PhD, MD (Medicine), Professor, Professor of the Department of Infectious Diseases, Head of the Department of Infectious Diseases on Faculty of Preventive Medicine,

Moscow

Россия

D. S. Chistyakov

I.M. Sechenov Moscow State Medical University

Email: fake@neicon.ru

Laboratory Technician, 

Moscow

D. S. Kostyushev

Central Research Institute of Epidemiology, Rospotrebnadzor

Email: dchistakoff@gmail.com

Researcher, 

Moscow

V. P. Chulanov

Central Research Institute of Epidemiology, Rospotrebnadzor;
I.M. Sechenov Moscow State Medical University

Email: vladimir.chulanov@rcvh.ru

PhD, MD (Medicine), Head of the Laboratory of Viral Hepatitis;

Professor of the Department of Infectious Diseases, Faculty of Preventive Medicine,

Moscow

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Copyright (c) 2019 Brezgin S.A., Kostyusheva A.P., Simirsky V.N., Volchkova E.V., Chistyakov D.S., Kostyushev D.S., Chulanov V.P.

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