EPIDEMIOLOGY AND CLINICAL CHARACTERISTICS OF METAPNEUMOVIRUS INFECTION IN HOSPITALIZED CHILDREN IN NOVOSIBIRSK IN 2019-2024
- Authors: Kurskaya O.G.1, Nokhova A.1, Saroyan T.1, Solomatina M.V.1, Kazachkova E.A.1, Gutova T.A.1, Anoshina A.V.2, Simkina O.A.2, Sharshov K.A.1, Shestopalov A.M.1
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Affiliations:
- Federal Research Center for Fundamental and Translational Medicine (FRC FTM), Novosibirsk, Russia
- State Budgetary Healthcare Institution of NSO «Children's City Clinical Hospital No. 6»
- Section: ORIGINAL ARTICLES
- Submitted: 31.03.2025
- Accepted: 25.07.2025
- URL: https://iimmun.ru/iimm/article/view/17906
- DOI: https://doi.org/10.15789/2220-7619-EAC-17906
- ID: 17906
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Abstract
Abstract
Introduction. Metapneumovirus frequently causes respiratory tract infections in children worldwide, with clinical manifestations ranging from mild upper respiratory tract disease to severe bronchiolitis and pneumonia. However, not all countries conduct regular metapneumovirus infection monitoring that complicates its infection trend analysis. The aim of the work was to analyze the etiological pattern of acute respiratory diseases by assessing proportion of metapneumovirus infection, as well as comparatively assess clinical characteristics of the main acute respiratory viral infections in children in Novosibirsk. Materials and Methods. Between November 2019 and May 2024, from children aged 0 - 17 years, admitted with symptoms of acute respiratory diseases there were collected and analyzed 6468 samples for metapneumovirus and other respiratory viruses using real-time polymerase chain reaction. Results. Viral etiology of acute respiratory diseases in hospitalized children was confirmed in 63.0% (4077/6468) of cases. The etiological ARVI pattern differed significantly in various epidemic seasons. Thus, in 2019 - 2020, influenza virus (27.8%) and respiratory syncytial virus (21.1%) dominated in the etiology of acute respiratory viral infections, while metapneumovirus was detected only in as few as 1.6% of children. In contrast, in 2020 - 2021, we observed a sharp increase in the detection rate of metapneumovirus (28%) paralleled with the absence of influenza virus and RSV. At the same time, in the following season (2021 - 2022) we did not detect any cases of metapneumovirus infection. In the following two seasons, the detection rate of metapneumovirus was about 5%: in children aged 3 - 6 years it was significantly higher than in infants and children aged 7 - 17 years. Clinical signs of metapneumovirus infection included fever, cough, dyspnoea, hypoxia and were similar to the manifestations of respiratory syncytial virus infection. At the same time, fever above 39°C and malaise were significantly more frequent in patients with influenza. Conclusion. Understanding the epidemiology of specific respiratory infections, compared with global trends, can help to develop targeted prevention and control measures.
About the authors
O. G. Kurskaya
Federal Research Center for Fundamental and Translational Medicine (FRC FTM), Novosibirsk, Russia
Email: kurskaya_og@mail.ru
ORCID iD: 0000-0002-1931-2026
M.Sc., Head of the Laboratory of Respiratory Viral Infections, S.Sc., Laboratory of Molecular Epidemiology and Virus Biodiversity
Россия, 630117, Novosibirsk, Timakov str., 2
Alina Nokhova
Federal Research Center for Fundamental and Translational Medicine (FRC FTM), Novosibirsk, Russia
Email: alina-nohova@mail.ru
ORCID iD: 0000-0002-7891-5847
Researcher at the Laboratory of Respiratory Viral Infections
Россия, 630117, г. Новосибирск, ул. Тимакова, 2Tereza Saroyan
Federal Research Center for Fundamental and Translational Medicine (FRC FTM), Novosibirsk, Russia
Email: 111.st.13@rambler.ru
ORCID iD: 0000-0001-8071-5425
Researcher at the Laboratory of Respiratory Viral Infections
РоссияMaria V. Solomatina
Federal Research Center for Fundamental and Translational Medicine (FRC FTM), Novosibirsk, Russia
Email: mvsolomatina@frcftm.ru
senior researcher of the Laboratory of Molecular Epidemiology and Biodiversity of Viruses, PhD.
Eugenia A. Kazachkova
Federal Research Center for Fundamental and Translational Medicine (FRC FTM), Novosibirsk, Russia
Email: kazachkova.evgeniya@gmail.com
Researcher of the Laboratory of Experimental Biology of Pathogenic Microorganisms.
РоссияTatyana A. Gutova
Federal Research Center for Fundamental and Translational Medicine (FRC FTM), Novosibirsk, Russia
Email: theshirskiucot@gmail.com
laboratory assistant at the Laboratory of Respiratory Viral Infections.
РоссияAnjelika V. Anoshina
State Budgetary Healthcare Institution of NSO «Children's City Clinical Hospital No. 6»
Email: anzhelika.anoshina2010@yandex.ru
Head of the Infectious Diseases Department GBUZ NSO «DGKB No. 6».
РоссияOlga A. Simkina
State Budgetary Healthcare Institution of NSO «Children's City Clinical Hospital No. 6»
Email: olgasimkina83@yandex.ru
epidemiologist GBUZ NSO «DGKB No. 3».
РоссияK. A. Sharshov
Federal Research Center for Fundamental and Translational Medicine (FRC FTM), Novosibirsk, Russia
Email: sharshov@yandex.ru
ORCID iD: 0000-0002-3946-9872
Head of the Laboratory of Molecular Epidemiology and Biodiversity of Viruses, PhD.
РоссияA. M. Shestopalov
Federal Research Center for Fundamental and Translational Medicine (FRC FTM), Novosibirsk, Russia
Author for correspondence.
Email: shestopalov2@mail.ru
Director of the Research Institute of Virology, FIC MTF, Doctor of Biological Sciences, Professor
Россия, NovosibirskReferences
- Baker RE, Park SW, Yang W, Vecchi GA, Metcalf CJE, Grenfell BT. The impact of COVID-19 nonpharmaceutical interventions on the future dynamics of endemic infections. Proc Natl Acad Sci U S A. 2020;117(48):30547–53. - doi: 10.1101/2020.06.22.20137588
- Belderok SM, Rimmelzwaan GF, van den Hoek A, et al. Effect of travel on influenza epidemiology. Emerg Infect Dis 2013; 19:925-31. - doi: 10.3201/eid1906.111864
- Boivin G, De Serres G, Côté S, Gilca R, Abed Y, Rochette L, Bergeron MG, Déry P. Human metapneumovirus infections in hospitalized children. Emerg Infect Dis. 2003 Jun;9(6):634-40. - doi: 10.3201/eid0906.030017
- Britton P.N., Hu N., Saravanos G., Shrapnel J., Davis J., Snelling T., Dalby-Payne J., Kesson A.M., Wood N., Macartney K., et al. COVID-19 public health measures and respiratory syncytial virus. Lancet Child Adolesc. Health. 2020;4:e42–e43. - doi: 10.1016/S2352-4642(20)30307-2
- Centers for Disease Control and Prevention 2020–2021 Flu Season Summary. [(accessed on 28 February 2023)]; Available online: - https://www.cdc.gov/flu/season/faq-flu-season-2020-2021.htm;
- Cho SJ, Kim SH, Lee H, Lee YU, Mun J, Park S, Park J, Park JS, Lee K, Lee CM, Seo J, Kim Y, Chung YS. Re-Emergence of HMPV in Gwangju, South Korea, after the COVID-19 Pandemic. Pathogens. 2023 Oct 4;12(10):1218. - doi: 10.3390/pathogens12101218
- Findlater A, Bogoch, II. Human mobility and the global spread of infectious diseases: a focus on air travel. Trends Parasitol 2018; 34:772-83. doi: 10.1016/j.pt.2018.07.004
- García-García ML, Pérez-Arenas E, Pérez-Hernandez P, Falces-Romero I, Ruiz S, Pozo F, Casas I, Calvo C. Human Metapneumovirus Infections during COVID-19 Pandemic, Spain. Emerg Infect Dis. 2023 Apr;29(4):850-852. - doi: 10.3201/eid2904.230046
- Hengming Ye, Shuqing Zhang, Kexin Zhang, Yizhe Li, Delin Chen, Yongyao Tan, Linyue Liang, Minjie Liu, Jingyao Liang, Shu An, Jueheng Wu, Xun Zhu, Mengfeng Li, Zhenjian He. Epidemiology, genetic characteristics, and association with meteorological factors of human metapneumovirus infection in children in southern China: A 10-year retrospective study. International Journal of Infectious Diseases, 2023 Oct, 8. Volume 137:40 – 47. - doi: 10.1016/j.ijid.2023.10.002
- Kahn JS. Epidemiology of human metapneumovirus. Clin Microbiol Rev. 2006 Jul;19(3):546-57. - doi: 10.1128/CMR.00014-06
- Li S, Xue Z, Feng Y, Zhou X, Qi Y, Feng N, Li Y. Epidemiological characteristics of eleven common respiratory viral infections in children. BMC Pediatr. 2024 Dec 20;24(1):827. - doi: 10.1186/s12887-024-05300-1.
- Maria Piñanaa, ∙ Alejandra González-Sáncheza, ∙ Cristina Andrésa, Michel Abantob, Jorgina Vilac, Juliana Esperalbaa, Noelia Morald ∙ Elena Espartosad ∙ Narcís Saubia, Anna Creusc ∙ Maria Gema Codinaa, Dolores Folgueirad ∙ Jaime Martinez-Urtazae, Tomàs Pumarolaa, Andrés Antón. The emergence, impact, and evolution of human metapneumovirus variants from 2014 to 2021 in Spain. Journal of Infection, 2023 May, 11.Volume 87, Issue 2:103 – 110. - doi: 10.1016/j.jinf.2023.05.004.
- Min X, Wang Y, Dong X, Dong X, Wang N, Wang Z, Shi L. Epidemiological characteristics of human metapneumovirus among children in Nanjing, China. Eur J Clin Microbiol Infect Dis. 2024 Jul;43(7):1445-1452. - doi: 10.1007/s10096-024-04858-z.
- Principi N, Autore G, Ramundo G, Esposito S. Epidemiology of Respiratory Infections during the COVID-19 Pandemic. Viruses. 2023 May 13;15(5):1160. doi: 10.3390/v15051160
- Shirato K, Suwa R, Nao N, Kawase M, Sugimoto S, Kume Y, Chishiki M, Ono T, Okabe H, Norito S, Sato M, Sakuma H, Suzuki S, Hosoya M, Takeda M, Hashimoto K. Molecular Epidemiology of Human Metapneumovirus in East Japan before and after COVID-19, 2017-2022. Jpn J Infect Dis. 2024 May 23;77(3):137-143. doi: 10.7883/yoken.JJID.2023.350
- Torres A.R., Guiomar R.G., Verdasca N., Melo A., Rodrigues A.P. Laboratórios para o Diagnóstico da Gripe. Resurgence of Respiratory Syncytial Virus in Children: An Out-of-Season Epidemic in Portugal. Acta Med. Port. 2023;36:343–352. doi: 10.20344/amp.18589
- «World Health Organization» Всемирная организация здравоохранения
- «Trends of acute respiratory infection, including human metapneumovirus, in the Northern Hemisphere»
- (интернет-ссылка) «World Health Organization»
- «Trends of acute respiratory infection, including human metapneumovirus, in the Northern Hemisphere» https://www.who.int/emergencies/disease-outbreak-news/item/2025-DON550
- Tulloch R.L., Kok J., Carter I., Dwyer D.E., Eden J.S. An amplicon-based approach for the whole-genome sequencing of human metapneumovirus. Viruses. 2021;13 doi: 10.3390/v13030499
- Ujiie M., Tsuzuki S., Nakamoto T., Iwamoto N. Resurgence of Respiratory Syncytial Virus Infections during COVID-19 Pandemic, Tokyo, Japan. Emerg. Infect. Dis. 2021;27:2969–2970. doi: 10.3201/eid2711.211565
- Van den Hoogen BG, et al. A newly discovered human pneumovirus isolated from young children with respiratory tract disease. Nat. Med. 2001;7:719–724. doi: 10.1038/89098
- Wang X, Li Y, Deloria-Knoll M, et al; Respiratory Virus Global Epidemiology Network. Global burden of acute lower respiratory infection associated with human metapneumovirus in children under 5 years in 2018: a systematic review and modelling study. Lancet Glob Health. 2021;9:e33–e43. doi: 10.1016/S2214-109X(20)30393-4
- Wolf D.G., Zakay-Rones Z., Fadeela A., Greenberg D., Dagan R. High seroprevalence of human metapneumovirus among young children in Israel. J. Infect. Dis. 2003;188:1865–1867. doi: 10.1086/380100
- Yang SL, Chiu TY, Tsai KL, Li CH, Yang JY, Liu MT, Wu FT. Epidemiology of human metapneumovirus in Taiwan from 2013 to 2023. Arch Virol. 2024 Oct 23;169(11):229. doi: 10.1007/s00705-024-06147-8.
- Zhao H, Feng Q, Feng Z, Zhu Y, Ai J, Xu B, Deng L, Sun Y, Li C, Jin R, Shang Y, Chen X, Xu L, Xie Z. Clinical characteristics and molecular epidemiology of human metapneumovirus in children with acute lower respiratory tract infections in China, 2017 to 2019: A multicentre prospective observational study. Virol Sin. 2022 Dec;37(6):874-882. doi: 10.1016/j.virs.2022.08.007
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