BIOLOGICAL PROPERTIES AND PATHOGENETIC POTENTIAL OF WEEKSELLACEAE FAMILY BACTERIA



Cite item

Full Text

Abstract

Abstract

In recent years, the role of former saprophyte bacteria in the etiology of human infectious diseases has become an increasingly pressing issue. Of particular interest are non-fermenting gram-negative bacteria, many of which are members of the rhizobiome in some plants, soil and water microbiome. Increasingly, scientific literature covers cases of infections caused by members of the order Flavobacteriales, namely the genus Chryseobacterium, Elizabethkingia and Empedobacter of the Weeksellaceae family. Microorganisms of the latter are causative agents in several human diseases, including urinary tract and respiratory tract infections. The aim of our study was to investigate the biological properties of bacteria of the genus Chryseobacterium, Elizabethkingia and Empedobacter of the Weeksellaceae family isolated from patients with cystic fibrosis and to assess their pathogenetic potential. To analyze the biological properties and pathogenetic potential, 32 clinical strains of bacteria belonging to the Weeksellaceae family, isolated from biological material samples of the respiratory tract from cystic fibrosis patients, were selected for the study. Differential diagnostic media and plate test systems were used. DNA was isolated using 5X ScreenMix (ZAO Evrogen) and PCR with gel electrophoresis was performed. Bacteria of the Weeksellaceae family are characterized by a wide range of enzymes, especially C. arthrosphaerae and E. meningoseptica. It was found that strains of the Chryseobacterium, Elizabethkingia and Empedobacter genus are carriers of virulence genes, exhibit pathogenicity and participate in chronic respiratory infections in patients with cystic fibrosis. Phenotypic methods for studying enzymatic activity showed that all the examined strains of bacteria of the Weeksellaceae family are characterized by gelatinase activity, and representatives of the genus Chryseobacterium spp. – also by the ability to synthesize plasma coagulase. The potential to produce other enzymes of aggression is less pronounced and was strain specific. Analysis of the genetic profile of virulence factors in the studied bacteria showed that in their genome, genes encoding the enzymes lecithinase, hyaluronidase, elastase and hemolysin were most often found, and in bacteria of the genus Chryseobacterium spp. and Empedobacter spp. – neuroaminidase, which contribute to overcoming tissue barriers, pathogen invasion and spread throughout host tissues. The obtained results and scientific literature data indicate a special clinical role for bacteria of the Weeksellaceae family, which determines the importance of a deep study of the biological properties and virulence factors in members of the genus Chryseobacterium spp., Elizabethkingia spp. and Empedobacter spp.

About the authors

Ksenia V. Zubova

Saratov State University

Email: zubovaksushechka@mail.ru

Assistant Professor, Department of Microbiology and Plant Physiology

Россия, 83 Astrakhanskaya Street, Saratov, Russia, 410012

Victoria A. Kuznetsova

"National Medical Research Center of Obstetrics, Gynecology and Perinatology named after Academician V.I. Kulakov" of the Ministry of Health of the Russian Federation

Email: kuznecovaviktoria803@yandex.ru

 specialist of the Laboratory for the collection and storage of biomaterials

Россия, 4 Akademika Oparina street, Moscow, Russia, 117513

Matvey V. Kanevsky

Saratov State University

Email: matvejkanev@mail.ru

PhD, Associate Professor of the Department of Biochemistry and Biophysics, Head of the Educational and Scientific Laboratory of Molecular Biology

Россия, 83 Astrakhanskaya Street, Saratov, Russia, 410012

Olga V. Kondratenko

Federal State Budgetary Educational Institution of Higher Education Samara State Medical University of the Ministry of Health of the Russian Federation

Email: helga1983@yandex.ru

Doctor of Medical Sciences, Associate Professor, Acting Head of the Department of Medical Microbiology and Immunology

Россия, 89 Chapaevskaya Street, Samara, 443099, Russia

Elena V. Glinskaya

Saratov State University

Email: elenavg-2007@yandex.ru

PhD, Associate Professor, Department of Microbiology and Plant Physiology

Россия

Olga V. Nechaeva

"National Medical Research Center of Obstetrics, Gynecology and Perinatology named after Academician V.I. Kulakov" of the Ministry of Health of the Russian Federation;
FSBEI FPE "Russian Medical Academy of Continuous Professional Education" of the Ministry of Healthcare of the Russian Federation

Email: olgav.nechaeva@rambler.ru
ORCID iD: 0000-0003-3331-1051
SPIN-code: 9984-9594

PhD, MD (Biology), Professor of the Department of Ecology and Technosphere Safety

Россия, 4 Akademika Oparina street, Moscow, Russia, 117513; 10/12 Polikarpova St., Moscow, 125284

Anna G. Afinogenova

St. Petersburg Pasteur Institut

Author for correspondence.
Email: spbtestcenter@mail.ru
ORCID iD: 0000-0001-8175-0708

doctor of biological science, head of testing laboratorial center

Россия

References

  1. Izaguirre-Anariba D. E., Sivapalan V. Chryseobacterium indologenes, an emerging bacteria: A case report and review of literature. Cureus. 2020. Vol. 12, no. 1. p. e6720
  2. Snesrud E., McGann P., Walsh E. Clinical and genomic features of the first cases of Elizabethkingia anophelis infection in New York, including the first case in a healthy infant without previous nosocomial exposure. Journal of the Pediatric Infectious Diseases Society. 2019. Vol. 8, no. 3. pp. 269-271
  3. Канашенко М.Е. Elizabethkingia meningoseptica как значимый клинический патоген / М.Е. Канашенко, Н.Н. Карцев, И.П. Мицевич [и др.] // Бактериология. 2019. Т. 4, №1. С. 58-63
  4. Abdalhamid B., Elhadi N., Alsamman K.., [et al.] Chryseobacterium gleum pneumonia in an infant with nephritic syndrome. IDCases. 2016. Vol. 5. pp. 34-36
  5. Ahsan M. J., Ahmad S., Latif A., [et al.] Chryseobacterium spp-associated bacteraemia in a haemodialysis patient: a diagnostic challenge. Case Reports CP. 2019. Vol. 12. p. e232000
  6. Corbella M., Brandolini M., Cambieri P., [et al.]: A catheter-related bloodstream infection caused by Chryseobacterium indologenes successfully treated with antibiotic-lock rescue therapy. New Microbiol. 2017. Vol. 40. pp. 223-225
  7. Swami M., Mude P., Kar S., [et al.] Devi U, et al. Elizabethkingia meningoseptica outbreak in NICU: an observational study on a debilitating neuroinfection in neonates. Pediatr Infect Dis J. 2024. Vol. 43, no.1. pp. 63-68
  8. Choi M. H., Kim M., Jeong S. J., [et al.] Risk factors for Elizabethkingia acquisition and clinical characteristics of patients, South Korea. Emerg Infect Dis. 2019. Vol. 25, no. 1. pp. 42-51
  9. Reed T. A. N., Watson G., Kheng C., Tan P., [et al.] Elizabethkingia anophelis infection in infants, Cambodia, 2012–2018. Emerging infectious diseases. 2020. Vol. 26, no. 2. pp. 320-322
  10. Y. Zeng, N. Dong, Z. Rong, [et al.] Emergence of an Empedobacter falsenii strain harbouring a tet(X)-variant-bearing novel plasmid conferring resistance to tigecycline. J Antimicrob Chemother. 2020. Vol. 75, no. 3. pp. 531-536.
  11. Maaroufi R., Dziri O., Hadjadj L., [et al.] Detection by whole-genome sequencing of a novel metallo-β-lactamase produced by Wautersiella falsenii causing urinary tract infection in Tunisia. Pol J Microbiol. 2022. Vol. 71, no. 1. pp. 73-81.
  12. A. Olowo-okere, I. Y. K. Enevene, O. B. Olalekan, [et al.] Genomic features of an isolate of Empedobacter falsenii harbouring a novel variant of metallo-β-lactamase, blaEBR-4 gene. Infect, Genet Evol. 2022. Vol. 98. p. 105234
  13. Martinez V, Matabang M. A., Miller D, [et al.] First case report on Empedobacter falsenii bacteremia. IDCases. 2023. Vol. 33. p. e01814.
  14. Chiang M. H., Chang F. J., Kesavan D. K., [et al.] Proteomic network of antibiotic-induced outer membrane vesicles released by extensively drug-resistant Elizabethkingia anopheles. Microbiol Spectr. 2022. p. e0026222
  15. McBride M. J. The Family Flavobacteriaceae. The Prokaryotes. 2014. pp. 643-667
  16. Bernardet, J. F., Order I. Flavobacteriales ord. nov. / J. F. Bernardet // Bergey's Manual of Systematic Bacteriology. New York. 2010. Vol. 2, no. 4. pp. 105-106
  17. Pickett M. J. Methods for identification of Flavobacteria. Journal of Clinical Microbiology. 1989. Vol. 27. pp. 2309-2315
  18. Wu, C., Xiong, L., Liao, Q. [et al.] Clinical manifestations, antimicrobial resistance and genomic feature analysis of multidrug-resistant Elizabethkingia strains. Ann Clin Microbiol Antimicrob. 2024. Vol. 23, no. 32. pp. 23-32
  19. Y. Zeng, N. Dong, R. Zhang, [et al.] Emergence of an Empedobacter falsenii strain harbouring a tet(X)-variant-bearing novel plasmid conferring resistance to tigecycline J. Antimicrob. Chemother. 2019. pp. 1-6
  20. Damas M. S. F., Ferreira R. L., Campanini E. B., [et al.] Whole genome sequencing of the multidrug-resistant Chryseobacterium indologenes isolated from a patient in Brazil. Front Med (Lausanne). 2022. Vol. 9. p. 931379.
  21. Izaguirre-Anariba D. E, Sivapalan V. Chryseobacterium indologenes, an emerging bacteria: a case report and review of literature. Cureus. 2020. Vol. 12. p. e6720.
  22. Zhang Y, Li D, Yang Y, [et al.] Clinical and molecular characteristics of Chryseobacterium indologenes isolates at a teaching hospital in Shanghai, China. Ann Transl Med. 2021. Vol. 9. p. 668
  23. Sud A., Chaudhary M., Baveja C., [et al.] Rare case of meningitis due to an emerging pathogen Chryseobacterium indologenes. SAGE Open Med Case Rep. 2020. Vol. 8. Pp. 1-4
  24. Andriyanov P. A., Zhurilov P. A., Kashina D. D., [et al.] Antimicrobial resistance and comparative genomic analysis of Elizabethkingia anophelis subsp. Endophytica isolated from raw milk. Antibiot (Basel). 2022. Vol. 11, no. 5. p. 648
  25. Tang H. J., Lin Y. T., Chen C. C., [et al.] Molecular characteristics and in vitro effects of antimicrobial combinations on planktonic and biofilm forms of Elizabethkingia anopheles. J Antimicrob Chemother. 2021. Vol. 76, no. 5. pp. 1205-1214
  26. Практические рекомендации для идентификации сапрофитных и условно-патогенных бактерий по фенотипическим признакам / А. М. Петерсон, П. А. Чиров; Сарат. гос. ун-т им. Н. Г. Чернышевского. - Саратов : Изд-во Сарат. ун-та, 2005 (Тип. Изд-ва). - 23, [1] с. : ил.; 21 см.; ISBN 5-292-03428-2 (в обл.)
  27. Боронина, Л. Г. Род Chryseobacterium (Flavobacterium): клиническое значение, идентификация, чувствительность к антибиотикам / Л. Г. Боронина, М. П. Кукушкина, К. В. Крутова [и др.] // Клиническая микробиология и антимикробная химиотерапия. 2003. Т. 5, № 3. С. 243-250
  28. Lim H. G., Seo S. W., Jung G. Y. Engineered Escherichia coli for simultaneous utilization of galactose and glucose. Bioresour Technol. 2013. Vol. 135. pp. 564-567.
  29. Bernardet, J. F. An introduction to the family Flavobacteriaceae / J. F. Bernardet, Y. Nakagawa. The Prokaryotes / eds M. Dworkin, S. Falkow, E. Rosenberg // New York : Springer. 2006. pp. 455-480
  30. Mirza, H. C. Clinical strains of Chryseobacterium and Elizabethkingia spp. isolated from pediatric patients in a university hospital: Performance of MALDI-TOF MS-based identification, antimicrobial susceptibilities, and baseline patient characteristics / H. C. Mirza, Ö. Tuncer, S. Ölmez [et al.]. Microbial. Drug. Resistance. 2018. Vol. 24, no. 6. pp. 816-821
  31. Кондратенко, О. В. Распространенность представителей порядка Flavobacteriales у пациентов с муковисцидозом в Российской Федерации / О. В. Кондратенко, К. В. Зубова, П. В. Бочкарева [и др.] // Проблемы медицинской микологии, 2023. № 1. С. 55-59
  32. Общая и санитарная микробиология с техникой микробиологических исследований: Учебное пособие / Под ред. А. С. Лабинской, Л. П. Блинковой, А. С. Ещиной. Москва , : Медицина, 2004. 576 с.
  33. Alon D., Karniel E., Zohar I., [et al.] Chryseobacterium indologenes bacteremia: clinical and microbiological characteristics of an emerging infection. Int J Clin Med. 2018. Vol. 9. pp. 520-527.
  34. Mwanza, E. P. Pathogenic potential and control of Chryseobacterium species from clinical, fish, food and environmental sources / E. P. Mwanza, A. Hugo, G. Charimba [et al.]. Microorganisms. 2022. Vol. 25, no. 5. p. 895

Supplementary files

Supplementary Files
Action
1. JATS XML

Copyright (c) Zubova K.V., Kuznetsova V.A., Kanevsky M.V., Kondratenko O.V., Glinskaya E.V., Nechaeva O.V., Afinogenova A.G.

Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 International License.

СМИ зарегистрировано Федеральной службой по надзору в сфере связи, информационных технологий и массовых коммуникаций (Роскомнадзор).
Регистрационный номер и дата принятия решения о регистрации СМИ: серия ПИ № ФС 77 - 64788 от 02.02.2016.


This website uses cookies

You consent to our cookies if you continue to use our website.

About Cookies